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» Generating Data Analysis Programs from Statistical Models
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NAR
2010
194views more  NAR 2010»
13 years 4 months ago
AltAnalyze and DomainGraph: analyzing and visualizing exon expression data
Alternative splicing is an important mechanism for increasing protein diversity. However, its functional effects are largely unknown. Here, we present our new software workflow co...
Dorothea Emig, Nathan Salomonis, Jan Baumbach, Tho...
ECMDAFA
2006
Springer
107views Hardware» more  ECMDAFA 2006»
14 years 27 days ago
Mutation Analysis Testing for Model Transformations
In MDE, model transformations should be efficiently tested so that it may be used and reused safely. Mutation analysis is an efficient technique to evaluate the quality of test dat...
Jean-Marie Mottu, Benoit Baudry, Yves Le Traon
ICDM
2005
IEEE
133views Data Mining» more  ICDM 2005»
14 years 2 months ago
Summarization - Compressing Data into an Informative Representation
In this paper, we formulate the problem of summarization of a dataset of transactions with categorical attributes as an optimization problem involving two objective functions - co...
Varun Chandola, Vipin Kumar
BMCBI
2005
130views more  BMCBI 2005»
13 years 9 months ago
MiMiR: a comprehensive solution for storage, annotation and exchange of microarray data
Background: The generation of large amounts of microarray data presents challenges for data collection, annotation, exchange and analysis. Although there are now widely accepted f...
Mahendra Navarange, Laurence Game, Derek Fowler, V...
BIOSYSTEMS
2007
115views more  BIOSYSTEMS 2007»
13 years 9 months ago
Evolving fuzzy rules to model gene expression
This paper develops an algorithm that extracts explanatory rules from microarray data, which we treat as time series, using genetic programming (GP) and fuzzy logic. Reverse polis...
Ricardo Linden, Amit Bhaya