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FM
2006
Springer
146views Formal Methods» more  FM 2006»
13 years 11 months ago
Formal Modeling of Communication Protocols by Graph Transformation
Formal modeling is a crucial first step in the analysis of safety critical communication protocols such as IP Telephony. These protocols are notoriously resistant to formal modelin...
Zarrin Langari, Richard J. Trefler
ASPLOS
2008
ACM
13 years 9 months ago
Optimistic parallelism benefits from data partitioning
Recent studies of irregular applications such as finite-element mesh generators and data-clustering codes have shown that these applications have a generalized data parallelism ar...
Milind Kulkarni, Keshav Pingali, Ganesh Ramanaraya...
CIKM
2008
Springer
13 years 9 months ago
Scalable community discovery on textual data with relations
Every piece of textual data is generated as a method to convey its authors' opinion regarding specific topics. Authors deliberately organize their writings and create links, ...
Huajing Li, Zaiqing Nie, Wang-Chien Lee, C. Lee Gi...
ISMB
2000
13 years 9 months ago
Pattern Recognition of Genomic Features with Microarrays: Site Typing of Mycobacterium Tuberculosis Strains
Mycobacterium tuberculosis (M. tb.) strains differ in the number and locations of a transposon-like insertion sequence known as IS6110. Accurate detection of this sequence can be ...
Soumya Raychaudhuri, Joshua M. Stuart, Xuemin Liu,...
BMCBI
2007
123views more  BMCBI 2007»
13 years 7 months ago
Heritable clustering and pathway discovery in breast cancer integrating epigenetic and phenotypic data
Background: In order to recapitulate tumor progression pathways using epigenetic data, we developed novel clustering and pathway reconstruction algorithms, collectively referred t...
Zailong Wang, Pearlly Yan, Dustin P. Potter, Chari...