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BMCBI
2007
123views more  BMCBI 2007»
13 years 9 months ago
Heritable clustering and pathway discovery in breast cancer integrating epigenetic and phenotypic data
Background: In order to recapitulate tumor progression pathways using epigenetic data, we developed novel clustering and pathway reconstruction algorithms, collectively referred t...
Zailong Wang, Pearlly Yan, Dustin P. Potter, Chari...
BMCBI
2007
174views more  BMCBI 2007»
13 years 9 months ago
ESTuber db: an online database for Tuber borchii EST sequences
Background: The ESTuber database (http://www.itb.cnr.it/estuber) includes 3,271 Tuber borchii expressed sequence tags (EST). The dataset consists of 2,389 sequences from an in-hou...
Barbara Lazzari, Andrea Caprera, Cristian Cosentin...
GCB
2007
Springer
91views Biometrics» more  GCB 2007»
14 years 3 months ago
Integrative Analysis of Transcriptome and Metabolome Data
Biological systems have to react to environmental and/or developmental changes by adjusting their biochemical/cellular machinery on numerous levels. In many cases small molecules ...
Lothar Willmitzer, Camila Caldana, Alisdair R. Fer...
JAVA
2000
Springer
14 years 22 days ago
Generating Java trace data
We describe a system for gathering and analyzing Java trace data. The system provides relatively complete data collection from large Java systems. It also provides a variety of di...
Steven P. Reiss, Manos Renieris
BMCBI
2006
129views more  BMCBI 2006»
13 years 9 months ago
Functional clustering of yeast proteins from the protein-protein interaction network
Background: The abundant data available for protein interaction networks have not yet been fully understood. New types of analyses are needed to reveal organizational principles o...
Taner Z. Sen, Andrzej Kloczkowski, Robert L. Jerni...