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» Genetic Algorithms for Protein Threading
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GECCO
2006
Springer
133views Optimization» more  GECCO 2006»
13 years 11 months ago
String transformation-based Bayesian classification or proteins
We describe a Markov chain Bayesian classification tool, SCS, that can perform data-driven classification of proteins and protein segments. Training data for interesting classific...
Timothy Meekhof, Gary W. Daughdrill, Robert B. Hec...
CEC
2009
IEEE
14 years 2 months ago
Evolutionary design of the energy function for protein structure prediction
— Automatic protein structure predictors use the notion of energy to guide the search towards good candidate structures. The energy functions used by the state-of-the-art predict...
Pawel Widera, Jonathan M. Garibaldi, Natalio Krasn...
INFOSCALE
2006
ACM
14 years 1 months ago
Scalable hardware accelerator for comparing DNA and protein sequences
Abstract— Comparing genetic sequences is a well-known problem in bioinformatics. Newly determined sequences are being compared to known sequences stored in databases in order to ...
Philippe Faes, Bram Minnaert, Mark Christiaens, Er...
CSB
2003
IEEE
111views Bioinformatics» more  CSB 2003»
14 years 23 days ago
A Block Coding Method that Leads to Significantly Lower Entropy Values for the Proteins and Coding Sections of Haemophilus influ
A simple statistical block code in combination with the LZW-based compression utilities gzip and compress has been found to increase by a significant amount the level of compressi...
G. Sampath
NAR
2007
132views more  NAR 2007»
13 years 7 months ago
Expanded protein information at SGD: new pages and proteome browser
The recent explosion in protein data generated from both directed small-scale studies and largescale proteomics efforts has greatly expanded the quantity of available protein info...
Robert S. Nash, Shuai Weng, Benjamin C. Hitz, Rama...