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» Genetic Programming Reconsidered
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SAC
2006
ACM
13 years 9 months ago
Challenges in the compilation of a domain specific language for dynamic programming
Many combinatorial optimization problems in biosequence analysis are solved via dynamic programming. To increase programming productivity and program reliability, a domain specifi...
Robert Giegerich, Peter Steffen
WOB
2004
120views Bioinformatics» more  WOB 2004»
13 years 10 months ago
Reconfigurable Systems for Sequence Alignment and for General Dynamic Programming
ABSTRACT. Reconfigurable systolic arrays can be adapted to efficiently resolve a wide spectrum of computational problems; parallelism is naturally explored in systolic arrays and r...
Ricardo P. Jacobi, Mauricio Ayala-Rincón, L...
CEC
2010
IEEE
13 years 10 months ago
Generating a novel sort algorithm using Reinforcement Programming
Abstract-- Reinforcement Programming (RP) is a new approach to automatically generating algorithms, that uses reinforcement learning techniques. This paper describes the RP approac...
Spencer K. White, Tony R. Martinez, George L. Rudo...
CEC
2010
IEEE
13 years 24 days ago
Tweaking a tower of blocks leads to a TMBL: Pursuing long term fitness growth in program evolution
— If a population of programs evolved not for a few hundred generations but for a few hundred thousand or more, could it generate more interesting behaviours and tackle more comp...
Tony E. Lewis, George D. Magoulas
RECOMB
2009
Springer
14 years 4 months ago
Pseudo Boolean Programming for Partially Ordered Genomes
Comparing genomes of different species is a crucial problem in comparative genomics. Different measures have been proposed to compare two genomes: number of common intervals, num...
Sébastien Angibaud, Guillaume Fertin, Annel...