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» Genome Annotation and Comparison System
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WOB
2004
102views Bioinformatics» more  WOB 2004»
13 years 11 months ago
An Agent-Based System for Re-annotation of Genomes
Genome annotation projects may produce wrong results since they may be based on obsolete data or wrong models. This work aims to develop an automatic re-annotation system that use ...
Leonardo Vianna do Nascimento, Ana L. C. Bazzan
CSB
2003
IEEE
124views Bioinformatics» more  CSB 2003»
14 years 3 months ago
SMASHing regulatory sites in DNA by human
Regulatory sequence elements provide important clues to understanding and predicting gene expression. Although the binding sites for hundreds of transcription factors are known, t...
Mihaela Zavolan, Nicholas D. Socci, Nikolaus Rajew...
BIB
2006
172views more  BIB 2006»
13 years 10 months ago
Advances in the Exon-Intron Database (EID)
Investigation of exon^intron gene structures is a non-trivial task due to enormous expansions of the eukaryotic genomes, great variety of gene forms, and the imperfectness in sequ...
Valery Shepelev, Alexei Fedorov
DILS
2005
Springer
14 years 3 months ago
PLATCOM: Current Status and Plan for the Next Stages
We have been developing a system for comparing multiple genomes, PLATCOM, where users can choose genomes of their choice freely and perform analysis of the selected genomes with a...
Kwangmin Choi, Jeong-Hyeon Choi, Amit Saple, Zhipi...
NAR
2006
170views more  NAR 2006»
13 years 9 months ago
The UCSC Genome Browser Database: update 2006
The University of California Santa Cruz Genome Browser Database (GBD) contains sequence and annotation data for the genomes of about a dozen vertebrate species and several major m...
Angela S. Hinrichs, Donna Karolchik, Robert Baerts...