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» Genome Sequence Assembly: Algorithms and Issues
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COMPUTER
2002
68views more  COMPUTER 2002»
13 years 7 months ago
Genome Sequence Assembly: Algorithms and Issues
Mihai Pop, Steven Salzberg, Martin Shumway
BMCBI
2007
151views more  BMCBI 2007»
13 years 7 months ago
Minimus: a fast, lightweight genome assembler
Background: Genome assemblers have grown very large and complex in response to the need for algorithms to handle the challenges of large whole-genome sequencing projects. Many of ...
Daniel D. Sommer, Arthur L. Delcher, Steven L. Sal...
RECOMB
2001
Springer
13 years 12 months ago
The greedy path-merging algorithm for sequence assembly
Two different approaches to determining the human genome are currently being pursued: one is the “clone-by-clone” approach, employed by the publicly-funded Human Genome Proje...
Daniel H. Huson, Knut Reinert, Eugene W. Myers
WABI
2009
Springer
156views Bioinformatics» more  WABI 2009»
14 years 2 months ago
Phylogenetic Comparative Assembly
Recent high throughput sequencing technologies are capable of generating a huge amount of data for bacterial genome sequencing projects. Although current sequence assemblers succes...
Peter Husemann, Jens Stoye
BMCBI
2011
13 years 1 months ago
Assessing the benefits of using mate-pairs to resolve repeats in de novo short-read prokaryotic assemblies
Background: Next-generation sequencing technologies allow genomes to be sequenced more quickly and less expensively than ever before. However, as sequencing technology has improve...
Joshua Wetzel, Carl Kingsford, Mihai Pop