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» GenomeBlast: A Web Tool for Small Genome Comparison
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SSDBM
2010
IEEE
220views Database» more  SSDBM 2010»
13 years 12 months ago
Prefix Tree Indexing for Similarity Search and Similarity Joins on Genomic Data
Similarity search and similarity join on strings are important for applications such as duplicate detection, error detection, data cleansing, or comparison of biological sequences....
Astrid Rheinländer, Martin Knobloch, Nicky Ho...
BMCBI
2007
152views more  BMCBI 2007»
13 years 7 months ago
A cross-species alignment tool (CAT)
Background: The main two sorts of automatic gene annotation frameworks are ab initio and alignment-based, the latter splitting into two sub-groups. The first group is used for int...
Heng Li, Liang Guan, Tao Liu, Yiran Guo, Wei-Mou Z...
SAC
2005
ACM
14 years 1 months ago
Where web engineering tool support ends: building usable websites
In this paper, two of the currently available Web Engineering solutions (UWE and OO-H) are analysed with regard to the question whether websites created with them and their tools ...
Richard Atterer
BMCBI
2005
86views more  BMCBI 2005»
13 years 7 months ago
WebArray: an online platform for microarray data analysis
Background: Many cutting-edge microarray analysis tools and algorithms, including commonly used limma and affy packages in Bioconductor, need sophisticated knowledge of mathematic...
Xiaoqin Xia, Michael McClelland, Yipeng Wang
BMCBI
2010
115views more  BMCBI 2010»
13 years 7 months ago
Non-coding RNA detection methods combined to improve usability, reproducibility and precision
Background: Non-coding RNAs gain more attention as their diverse roles in many cellular processes are discovered. At the same time, the need for efficient computational prediction...
Peter Raasch, Ulf Schmitz, Nadja Patenge, Julio Ve...