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» Genomorama: genome visualization and analysis
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IPPS
2005
IEEE
14 years 1 months ago
Dynamic Scalable Visualization for Collaborative Scientific Applications
Science disciplines are experiencing a data avalanche. As a result, scientific research is limited by data analysis and visualization capabilities. We have been working closely wi...
Kai Li, Matthew A. Hibbs, Grant Wallace, Olga G. T...
BMCBI
2008
187views more  BMCBI 2008»
13 years 7 months ago
PSAT: A web tool to compare genomic neighborhoods of multiple prokaryotic genomes
Background: The conservation of gene order among prokaryotic genomes can provide valuable insight into gene function, protein interactions, or events by which genomes have evolved...
Christine Fong, Laurence Rohmer, Matthew Radey, Mi...
NAR
2011
234views Computer Vision» more  NAR 2011»
12 years 10 months ago
The UCSC cancer genomics browser: update 2011
The UCSC Cancer Genomics Browser (https:// genome-cancer.ucsc.edu) comprises a suite of web-based tools to integrate, visualize and analyze cancer genomics and clinical data. The ...
J. Zachary Sanborn, Stephen C. Benz, Brian Craft, ...
JCB
2006
97views more  JCB 2006»
13 years 7 months ago
Wavelet Analysis of DNA Walks
A wavelet transform of the DNA "walk" constructed from a genomic sequence offers a direct visualization of short and long-range patterns in nucleotide sequences. We stud...
Adrian D. Haimovich, Bruce Byrne, Ramakrishna Rama...
ISMB
2000
13 years 9 months ago
Computation and Visualization of Degenerate Repeats in Complete Genomes
The repetitive structure of genomic DNA holds many secrets to be discovered. A systematic study of repetitive DNA on a genomic or inter-genomic scale requires extensive algorithmi...
Stefan Kurtz, Enno Ohlebusch, Chris Schleiermacher...