22 search results - page 2 / 5 » Geometric Suffix Tree: A New Index Structure for Protein 3-D... |
EDBT
2012
ACM
11 years 10 months ago
2012
ACM
Increased availability of large repositories of chemical compounds has created new challenges and opportunities for the application of data-mining and indexing techniques to probl...
WWW
2007
ACM
14 years 8 months ago
2007
ACM
In this paper, we propose a new similarity measure to compute the pairwise similarity of text-based documents based on suffix tree document model. By applying the new suffix tree ...
BMCBI
2005
13 years 7 months ago
2005
Background: Structure-dependent substitution matrices increase the accuracy of sequence alignments when the 3D structure of one sequence is known, and are successful e.g. in fold ...
RECOMB
1999
Springer
13 years 12 months ago
1999
Springer
We consider the problem of identifying common three-dimensional substructures between proteins. Our method is based on comparing the shape of the α-carbon backbone structures of ...
BMCBI
2007
13 years 7 months ago
2007
Background: An accurate description of protein shape derived from protein structure is necessary to establish an understanding of protein-ligand interactions, which in turn will l...