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» Geometry of gene expression dynamics
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BMCBI
2005
112views more  BMCBI 2005»
13 years 7 months ago
Vector analysis as a fast and easy method to compare gene expression responses between different experimental backgrounds
Background: Gene expression studies increasingly compare expression responses between different experimental backgrounds (genetic, physiological, or phylogenetic). By focusing on ...
Rainer Breitling, Patrick Armengaud, Anna Amtmann
BMCBI
2007
169views more  BMCBI 2007»
13 years 7 months ago
Transcriptional regulatory network refinement and quantification through kinetic modeling, gene expression microarray data and i
Background: Gene expression microarray and other multiplex data hold promise for addressing the challenges of cellular complexity, refined diagnoses and the discovery of well-targ...
Abdallah Sayyed-Ahmad, Kagan Tuncay, Peter J. Orto...
KDD
2002
ACM
183views Data Mining» more  KDD 2002»
14 years 8 months ago
E-CAST: A Data Mining Algorithm for Gene Expression Data
Data clustering methods have been proven to be a successful data mining technique in the analysis of gene expression data. The Cluster affinity search technique (CAST) developed b...
Abdelghani Bellaachia, David Portnoy, Yidong Chen,...
BMCBI
2011
13 years 2 months ago
The impact of quantitative optimization of hybridization conditions on gene expression analysis
Background: With the growing availability of entire genome sequences, an increasing number of scientists can exploit oligonucleotide microarrays for genome-scale expression studie...
Peter Sykacek, David P. Kreil, Lisa A. Meadows, Ri...
KDD
2009
ACM
249views Data Mining» more  KDD 2009»
14 years 8 months ago
Drosophila gene expression pattern annotation using sparse features and term-term interactions
The Drosophila gene expression pattern images document the spatial and temporal dynamics of gene expression and they are valuable tools for explicating the gene functions, interac...
Shuiwang Ji, Lei Yuan, Ying-Xin Li, Zhi-Hua Zhou, ...