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JIB
2008
60views more  JIB 2008»
13 years 7 months ago
Graph-based sequence annotation using a data integration approach
Robert Pesch, Artem Lysenko, Matthew Hindle, Keywa...
BMCBI
2010
160views more  BMCBI 2010»
13 years 7 months ago
Annotation of gene promoters by integrative data-mining of ChIP-seq Pol-II enrichment data
Background: Use of alternative gene promoters that drive widespread cell-type, tissue-type or developmental gene regulation in mammalian genomes is a common phenomenon. Chromatin ...
Ravi Gupta, Priyankara Wikramasinghe, Anirban Bhat...
DILS
2005
Springer
14 years 1 months ago
Hybrid Integration of Molecular-Biological Annotation Data
: We present a new approach to integrate annotation data from public sources for the expression analysis of genes and proteins. Expression data is materialized in a data warehouse ...
Toralf Kirsten, Hong Hai Do, Christine Körner...
BMCBI
2007
108views more  BMCBI 2007»
13 years 7 months ago
Integrating sequence and structural biology with DAS
Background: The Distributed Annotation System (DAS) is a network protocol for exchanging biological data. It is frequently used to share annotations of genomes and protein sequenc...
Andreas Prlic, Thomas A. Down, Eugene Kulesha, Rob...
CORR
1999
Springer
164views Education» more  CORR 1999»
13 years 7 months ago
Annotation graphs as a framework for multidimensional linguistic data analysis
In recent work we have presented a formal framework for linguistic annotation based on labeled acyclic digraphs. These `annotation graphs' oer a simple yet powerful method fo...
Steven Bird, Mark Liberman