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BMCBI
2006
111views more  BMCBI 2006»
13 years 8 months ago
Tools for integrated sequence-structure analysis with UCSF Chimera
Background: Comparing related structures and viewing the structures in the context of sequence alignments are important tasks in protein structure-function research. While many pr...
Elaine C. Meng, Eric F. Pettersen, Gregory S. Couc...
BMCBI
2006
202views more  BMCBI 2006»
13 years 8 months ago
DWARF - a data warehouse system for analyzing protein families
Background: The emerging field of integrative bioinformatics provides the tools to organize and systematically analyze vast amounts of highly diverse biological data and thus allo...
Markus Fischer, Quan K. Thai, Melanie Grieb, J&uum...
BIBM
2008
IEEE
175views Bioinformatics» more  BIBM 2008»
14 years 3 months ago
Integrative Protein Function Transfer Using Factor Graphs and Heterogeneous Data Sources
We propose a novel approach for predicting protein functions of an organism by coupling sequence homology and PPI data between two (or more) species with multifunctional Gene Onto...
Antonina Mitrofanova, Vladimir Pavlovic, Bud Mishr...
LREC
2010
197views Education» more  LREC 2010»
13 years 10 months ago
Automatic Annotation of Co-Occurrence Relations
We introduce a method for automatically labelling edges of word co-occurrence graphs with semantic relations. Therefore we only make use of training data already contained within ...
Dirk Goldhahn, Uwe Quasthoff
SEMWEB
2009
Springer
14 years 1 months ago
Enrichment and Ranking of the YouTube Tag Space and Integration with the Linked Data Cloud
The increase of personal digital cameras with video functionality and video-enabled camera phones has increased the amount of user-generated videos on the Web. People are spending ...
Smitashree Choudhury, John G. Breslin, Alexandre P...