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BMCBI
2011
13 years 2 months ago
Proportion statistics to detect differentially expressed genes: a comparison with log-ratio statistics
Background: In genetic transcription research, gene expression is typically reported in a test sample relative to a reference sample. Laboratory assays that measure gene expressio...
Tracy L. Bergemann, Jason Wilson
BMCBI
2007
109views more  BMCBI 2007»
13 years 11 months ago
TABASCO: A single molecule, base-pair resolved gene expression simulator
Background: Experimental studies of gene expression have identified some of the individual molecular components and elementary reactions that comprise and control cellular behavio...
Sriram Kosuri, Jason R. Kelly, Drew Endy
BMCBI
2007
97views more  BMCBI 2007»
13 years 11 months ago
In situ analysis of cross-hybridisation on microarrays and the inference of expression correlation
Background: Microarray co-expression signatures are an important tool for studying gene function and relations between genes. In addition to genuine biological co-expression, corr...
Tineke Casneuf, Yves Van de Peer, Wolfgang Huber
SIGCOMM
2006
ACM
14 years 5 months ago
Algorithms to accelerate multiple regular expressions matching for deep packet inspection
There is a growing demand for network devices capable of examining the content of data packets in order to improve network security and provide application-specific services. Most...
Sailesh Kumar, Sarang Dharmapurikar, Fang Yu, Patr...
BMCBI
2010
98views more  BMCBI 2010»
13 years 11 months ago
Learning to predict expression efficacy of vectors in recombinant protein production
Background: Recombinant protein production is a useful biotechnology to produce a large quantity of highly soluble proteins. Currently, the most widely used production system is t...
Wen-Ching Chan, Po-Huang Liang, Yan-Ping Shih, Uen...