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BMCBI
2007
104views more  BMCBI 2007»
13 years 7 months ago
Identification of putative regulatory upstream ORFs in the yeast genome using heuristics and evolutionary conservation
Background: The translational efficiency of an mRNA can be modulated by upstream open reading frames (uORFs) present in certain genes. A uORF can attenuate translation of the main...
Marija Cvijovic, Daniel Dalevi, Elizabeth Bilsland...
CP
2003
Springer
14 years 22 days ago
A SAT-Based Approach to Multiple Sequence Alignment
Multiple sequence alignment is a central problem in Bioinformatics. A known integer programming approach is to apply branch-and-cut to exponentially large graph-theoretic models. T...
Steven David Prestwich, Desmond G. Higgins, Orla O...
ICFP
2007
ACM
14 years 7 months ago
Relating complexity and precision in control flow analysis
We analyze the computational complexity of kCFA, a hierarchy of control flow analyses that determine which functions may be applied at a given call-site. This hierarchy specifies ...
David Van Horn, Harry G. Mairson
COMPLIFE
2005
Springer
14 years 1 months ago
Fast and Accurate Structural RNA Alignment by Progressive Lagrangian Optimization
During the last few years new functionalities of RNA have been discovered, renewing the need for computational tools for their analysis. To this respect, multiple sequence alignmen...
Markus Bauer, Gunnar W. Klau, Knut Reinert
ECCV
2000
Springer
14 years 9 months ago
Coupled Geodesic Active Regions for Image Segmentation: A Level Set Approach
Abstract. This paper presents anovel variational method forimage segmentation that uni es boundary and region-based information sources under the Geodesic Active Region framework. ...
Nikos Paragios, Rachid Deriche