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» Hardness Results for Homology Localization
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ICASSP
2007
IEEE
14 years 1 months ago
Toward Turbo Decoding of RNA Secondary Structure
We propose an iterative probabilistic algorithm for estimation of RNA secondary structure using sequence data from two homologous sequences. The method is intended to exploit inte...
Arif Ozgun Harmanci, Gaurav Sharma, David H. Mathe...
BMCBI
2008
109views more  BMCBI 2008»
13 years 7 months ago
ConStruct: Improved construction of RNA consensus structures
Background: Aligning homologous non-coding RNAs (ncRNAs) correctly in terms of sequence and structure is an unresolved problem, due to both mathematical complexity and imperfect s...
Andreas Wilm, Kornelia Linnenbrink, Gerhard Steger
MOBIHOC
2006
ACM
14 years 7 months ago
Distributed localization using noisy distance and angle information
Localization is an important and extensively studied problem in ad-hoc wireless sensor networks. Given the connectivity graph of the sensor nodes, along with additional local info...
Amitabh Basu, Jie Gao, Joseph S. B. Mitchell, Giri...
KR
2004
Springer
14 years 22 days ago
An Improved Integer Local Search for Complex Scheduling Problems
We consider complex scheduling problems that can be captured as optimization under hard and soft constraints. The objective of such an optimization problem is to satisfy as many h...
Weixiong Zhang, Xiaotao Zhang
PRICAI
1998
Springer
13 years 11 months ago
Dynamic Constraint Weighting for Over-Constrained Problems
Many real-world constraint satisfaction problems (CSPs) can be over-constrained but contain a set of mandatory or hard constraints that have to be satisfied for a solution to be ac...
John Thornton, Abdul Sattar