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» Having a BLAST: Analyzing Gene Sequence Data with BlastQuest
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BIOCOMP
2006
13 years 8 months ago
Performance of Sequence Alignment Bioinformatics Applications on General Purpose Processors: A Case Study
- Aligning specific sequences against other known sequences in a database is a central aspect of bioinformatics. New experimental data being added continuously to these databases n...
Pradeep Nair, Eugene John
NAR
2007
115views more  NAR 2007»
13 years 6 months ago
DroSpeGe: rapid access database for new Drosophila species genomes
The Drosophila species comparative genome database DroSpeGe (http://insects.eugenes.org/ DroSpeGe/) provides genome researchers with rapid, usable access to 12 new and old Drosoph...
Donald G. Gilbert
BMCBI
2008
160views more  BMCBI 2008»
13 years 7 months ago
Predicting cancer involvement of genes from heterogeneous data
Background: Systematic approaches for identifying proteins involved in different types of cancer are needed. Experimental techniques such as microarrays are being used to characte...
Ramon Aragues, Chris Sander, Baldo Oliva
BMCBI
2006
130views more  BMCBI 2006»
13 years 7 months ago
CARMA: A platform for analyzing microarray datasets that incorporate replicate measures
Background: The incorporation of statistical models that account for experimental variability provides a necessary framework for the interpretation of microarray data. A robust ex...
Kevin A. Greer, Matthew R. McReynolds, Heddwen L. ...
NAR
2010
174views more  NAR 2010»
13 years 2 months ago
BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum
BeetleBase (http://www.beetlebase.org) has been updated to provide more comprehensive genomic information for the red flour beetle Tribolium castaneum. The database contains genom...
Hee Shin Kim, Terence Murphy, Jing Xia, Doina Cara...