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» Heuristics for the Phylogeny Problem
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CPM
2004
Springer
84views Combinatorics» more  CPM 2004»
14 years 1 months ago
Small Phylogeny Problem: Character Evolution Trees
Abstract. Phylogenetics is a science of determining connections between groups of organisms in terms of ancestor/descendent relationships, usually expressed by phylogenetic trees, ...
Arvind Gupta, Ján Manuch, Ladislav Stacho, ...
SC
1995
ACM
13 years 11 months ago
Parallelizing the Phylogeny Problem
The problem of determining the evolutionary history of species in the form of phylogenetic trees is known as the phylogeny problem. We present a parallelization of the character c...
Jeff A. Jones, Katherine A. Yelick
RECOMB
2007
Springer
14 years 1 months ago
Parts of the Problem of Polyploids in Rearrangement Phylogeny
Abstract. Genome doubling simultaneously doubles all genetic markers. Genome rearrangement phylogenetics requires that all genomes analyzed have the same set of orthologs, so that ...
Chunfang Zheng, Qian Zhu, David Sankoff
ICDT
2010
ACM
141views Database» more  ICDT 2010»
13 years 11 months ago
The Complexity of Rooted Phylogeny problems
Several computational problems in phylogenetic reconstruction can be formulated as restrictions of the following general problem: given a formula in conjunctive normal form where ...
Manuel Bodirsky, Jens K. Mueller