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ICML
2005
IEEE
14 years 11 months ago
Predicting protein folds with structural repeats using a chain graph model
Protein fold recognition is a key step towards inferring the tertiary structures from amino-acid sequences. Complex folds such as those consisting of interacting structural repeat...
Yan Liu, Eric P. Xing, Jaime G. Carbonell
KDD
2007
ACM
132views Data Mining» more  KDD 2007»
14 years 11 months ago
A scalable modular convex solver for regularized risk minimization
A wide variety of machine learning problems can be described as minimizing a regularized risk functional, with different algorithms using different notions of risk and different r...
Choon Hui Teo, Alex J. Smola, S. V. N. Vishwanatha...
KDD
2006
ACM
162views Data Mining» more  KDD 2006»
14 years 11 months ago
Simultaneous record detection and attribute labeling in web data extraction
Recent work has shown the feasibility and promise of templateindependent Web data extraction. However, existing approaches use decoupled strategies ? attempting to do data record ...
Jun Zhu, Zaiqing Nie, Ji-Rong Wen, Bo Zhang, Wei-Y...
RECOMB
2006
Springer
14 years 11 months ago
CONTRAlign: Discriminative Training for Protein Sequence Alignment
In this paper, we present CONTRAlign, an extensible and fully automatic framework for parameter learning and protein pairwise sequence alignment using pair conditional random field...
Chuong B. Do, Samuel S. Gross, Serafim Batzoglou
ICDE
2010
IEEE
224views Database» more  ICDE 2010»
14 years 10 months ago
Probabilistic Declarative Information Extraction
Abstract-Unstructured text represents a large fraction of the world's data. It often contain snippets of structured information within them (e.g., people's names and zip ...
Daisy Zhe Wang, Eirinaios Michelakis, Joseph M. He...