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» Hidden Markov Modelling Techniques for Haplotype Analysis
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BMCBI
2007
105views more  BMCBI 2007»
13 years 7 months ago
Constrained hidden Markov models for population-based haplotyping
abstract Niels Landwehr1 , Taneli Mielik¨ainen2 , Lauri Eronen2 , Hannu Toivonen1,2 , and Heikki Mannila2 1 Machine Learning Lab, Dept. of Comp. Science, University of Freiburg, G...
Niels Landwehr, Taneli Mielikäinen, Lauri Ero...
BMCBI
2008
138views more  BMCBI 2008»
13 years 7 months ago
Inference of haplotypic phase and missing genotypes in polyploid organisms and variable copy number genomic regions
Background: The power of haplotype-based methods for association studies, identification of regions under selection, and ancestral inference, is well-established for diploid organ...
Shu-Yi Su, Jonathan White, David J. Balding, Lachl...
JCB
2006
123views more  JCB 2006»
13 years 7 months ago
Reconstructing Ancestral Haplotypes with a Dictionary Model
We propose a dictionary model for haplotypes. According to the model, a haplotype is constructed by randomly concatenating haplotype segments from a given dictionary of segments. ...
Kristin L. Ayers, Chiara Sabatti, Kenneth Lange
NIPS
2003
13 years 8 months ago
Markov Models for Automated ECG Interval Analysis
We examine the use of hidden Markov and hidden semi-Markov models for automatically segmenting an electrocardiogram waveform into its constituent waveform features. An undecimated...
Nicholas P. Hughes, Lionel Tarassenko, Stephen J. ...
ICDM
2005
IEEE
189views Data Mining» more  ICDM 2005»
14 years 18 days ago
Integrating Hidden Markov Models and Spectral Analysis for Sensory Time Series Clustering
We present a novel approach for clustering sequences of multi-dimensional trajectory data obtained from a sensor network. The sensory time-series data present new challenges to da...
Jie Yin, Qiang Yang