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POPL
2004
ACM
14 years 8 months ago
Parsing expression grammars: a recognition-based syntactic foundation
For decades we have been using Chomsky's generative system of grammars, particularly context-free grammars (CFGs) and regular expressions (REs), to express the syntax of prog...
Bryan Ford
BMCBI
2005
144views more  BMCBI 2005»
13 years 7 months ago
Redefinition of Affymetrix probe sets by sequence overlap with cDNA microarray probes reduces cross-platform inconsistencies in
Background: Comparison of data produced on different microarray platforms often shows surprising discordance. It is not clear whether this discrepancy is caused by noisy data or b...
Scott L. Carter, Aron C. Eklund, Brigham H. Mecham...
BMCBI
2007
130views more  BMCBI 2007»
13 years 7 months ago
Reproducibility of microarray data: a further analysis of microarray quality control (MAQC) data
Background: Many researchers are concerned with the comparability and reliability of microarray gene expression data. Recent completion of the MicroArray Quality Control (MAQC) pr...
James J. Chen, Huey-miin Hsueh, Robert R. Delongch...
BMCBI
2008
115views more  BMCBI 2008»
13 years 7 months ago
Genome-scale cluster analysis of replicated microarrays using shrinkage correlation coefficient
Background: Currently, clustering with some form of correlation coefficient as the gene similarity metric has become a popular method for profiling genomic data. The Pearson corre...
Jianchao Yao, Chunqi Chang, Mari L. Salmi, Yeung S...
ICECCS
2007
IEEE
154views Hardware» more  ICECCS 2007»
14 years 2 months ago
A light-weight static approach to analyzing UML behavioral properties
Identifying and resolving design problems in the early design phase can help ensure software quality and save costs. There are currently few tools for analyzing designs expressed ...
Lijun Yu, Robert B. France, Indrakshi Ray, Kevin L...