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BMCBI
2006
156views more  BMCBI 2006»
15 years 4 months ago
GOFFA: Gene Ontology For Functional Analysis - A FDA Gene Ontology Tool for Analysis of Genomic and Proteomic Data
Background: Gene Ontology (GO) characterizes and categorizes the functions of genes and their products according to biological processes, molecular functions and cellular componen...
Hongmei Sun, Hong Fang, Tao Chen, Roger Perkins, W...
TASE
2008
IEEE
15 years 4 months ago
Mechanism Design for Single Leader Stackelberg Problems and Application to Procurement Auction Design
In this paper, we focus on mechanism design for single leader Stackelberg problems, which are a special case of hierarchical decision making problems in which a distinguished agent...
Dinesh Garg, Y. Narahari
BMCBI
2004
126views more  BMCBI 2004»
15 years 4 months ago
Visualization and analysis of microarray and gene ontology data with treemaps
Background: The increasing complexity of genomic data presents several challenges for biologists. Limited computer monitor views of data complexity and the dynamic nature of data ...
Eric H. Baehrecke, Niem Dang, Ketan Babaria, Ben S...
PVLDB
2010
110views more  PVLDB 2010»
15 years 2 months ago
Read-Once Functions and Query Evaluation in Probabilistic Databases
Probabilistic databases hold promise of being a viable means for large-scale uncertainty management, increasingly needed in a number of real world applications domains. However, q...
Prithviraj Sen, Amol Deshpande, Lise Getoor
BMCBI
2011
14 years 11 months ago
Properties of Metabolic Graphs: Biological Organization or Representation Artifacts?
Background: Standard graphs, where each edge links two nodes, have been extensively used to represent the connectivity of metabolic networks. It is based on this representation th...
Wanding Zhou, Luay Nakhleh