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ICS
2009
Tsinghua U.
13 years 5 months ago
Efficient high performance collective communication for the cell blade
This paper presents high-performance collective communication algorithms and implementations that exploit the unique architectural features of the Cell heterogeneous multicore pro...
Qasim Ali, Samuel P. Midkiff, Vijay S. Pai
CLUSTER
2003
IEEE
14 years 26 days ago
A Cluster-Based Solution for High Performance Hmmpfam Using EARTH Execution Model
Hmmpfam is a widely used computation-intensive bioinformatics software for sequence classification. The contribution of this paper is the first largely scalable and robust clust...
Weirong Zhu, Yanwei Niu, Jizhu Lu, Chuan Shen, Gua...
CCECE
2006
IEEE
14 years 1 months ago
Survey of Biological High Performance Computing: Algorithms, Implementations and Outlook Research
During recent years there has been an explosive growth of biological data coming from genome projects, proteomics, protein structure determination, and the rapid expansion in digi...
Nasreddine Hireche, J. M. Pierre Langlois, Gabriel...
PPOPP
2003
ACM
14 years 24 days ago
User-controllable coherence for high performance shared memory multiprocessors
In programming high performance applications, shared address-space platforms are preferable for fine-grained computation, while distributed address-space platforms are more suita...
Collin McCurdy, Charles N. Fischer
IPPS
2007
IEEE
14 years 1 months ago
A Study of Design Efficiency with a High-Level Language for FPGAs
Over the years reconfigurable computing devices such as FPGAs have evolved from gate-level glue logic to complex reprogrammable processing architectures. However, the tools used f...
Zain-ul-Abdin, Bertil Svensson