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    BIOINFORMATICS
    2007
    195views more  BIOINFORMATICS 2007»
    Context-dependent clustering for dynamic cellular state modeling of microarray gene expression
    13 years 8 months ago
    Context-dependent clustering for dynamic cellular state modeling of microarray gene expression
    Download  www.stat.ucla.edu
    Motivation: High-throughput expression profiling allows researchers to study gene activities globally. Genes with similar expression profiles are likely to encode proteins that ma...
    Shinsheng Yuan, Ker-Chau Li
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    BMCBI
    2010
    135views more  BMCBI 2010»
    Lists2Networks: Integrated analysis of gene/protein lists
    13 years 8 months ago
    Lists2Networks: Integrated analysis of gene/protein lists
    Download  www.biomedcentral.com
    Background: Systems biologists are faced with the difficultly of analyzing results from large-scale studies that profile the activity of many genes, RNAs and proteins, applied in ...
    Alexander Lachmann, Avi Ma'ayan
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    BMCBI
    2010
    117views more  BMCBI 2010»
    New decoding algorithms for Hidden Markov Models using distance measures on labellings
    13 years 8 months ago
    New decoding algorithms for Hidden Markov Models using distance measures on labellings
    Download  www.biomedcentral.com
    Background: Existing hidden Markov model decoding algorithms do not focus on approximately identifying the sequence feature boundaries. Results: We give a set of algorithms to com...
    Daniel G. Brown 0001, Jakub Truszkowski
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    BMCBI
    2007
    176views more  BMCBI 2007»
    Genome Expression Pathway Analysis Tool - Analysis and visualization of microarray gene expression data under genomic, proteomic
    13 years 8 months ago
    Genome Expression Pathway Analysis Tool - Analysis and visualization of microarray gene expression data under genomic, proteomic
    Download  www.biomedcentral.com
    Background: Regulation of gene expression is relevant to many areas of biology and medicine, in the study of treatments, diseases, and developmental stages. Microarrays can be use...
    Markus Weniger, Julia C. Engelmann, Jörg Schu...
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    BMCBI
    2008
    168views more  BMCBI 2008»
    Predicting protein folding pathways at the mesoscopic level based on native interactions between secondary structure elements
    13 years 8 months ago
    Predicting protein folding pathways at the mesoscopic level based on native interactions between secondary structure elements
    Download  www.biomedcentral.com
    Background: Since experimental determination of protein folding pathways remains difficult, computational techniques are often used to simulate protein folding. Most current techn...
    Qingwu Yang, Sing-Hoi Sze
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