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    BMCBI
    2008
    95views more  BMCBI 2008»
    Mining protein networks for synthetic genetic interactions
    13 years 8 months ago
    Mining protein networks for synthetic genetic interactions
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    Background: The local connectivity and global position of a protein in a protein interaction network are known to correlate with some of its functional properties, including its e...
    Sri R. Paladugu, Shan Zhao, Animesh Ray, Alpan Rav...
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    BMCBI
    2007
    106views more  BMCBI 2007»
    Discovering functional linkages and uncharacterized cellular pathways using phylogenetic profile comparisons: a comprehensive as
    13 years 8 months ago
    Discovering functional linkages and uncharacterized cellular pathways using phylogenetic profile comparisons: a comprehensive as
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    Background: A widely-used approach for discovering functional and physical interactions among proteins involves phylogenetic profile comparisons (PPCs). Here, proteins with simila...
    Raja Jothi, Teresa M. Przytycka, L. Aravind
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    BMCBI
    2008
    101views more  BMCBI 2008»
    Prediction of glycosylation sites using random forests
    13 years 8 months ago
    Prediction of glycosylation sites using random forests
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    Background: Post translational modifications (PTMs) occur in the vast majority of proteins and are essential for function. Prediction of the sequence location of PTMs enhances the...
    Stephen E. Hamby, Jonathan D. Hirst
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    BMCBI
    2006
    181views more  BMCBI 2006»
    Array2BIO: from microarray expression data to functional annotation of co-regulated genes
    13 years 8 months ago
    Array2BIO: from microarray expression data to functional annotation of co-regulated genes
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    Background: There are several isolated tools for partial analysis of microarray expression data. To provide an integrative, easy-to-use and automated toolkit for the analysis of A...
    Gabriela G. Loots, Patrick S. G. Chain, Shalini Ma...
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    CSB
    2005
    IEEE
    133views Bioinformatics» more  CSB 2005»
    Biological Pathway Prediction from Multiple Data Sources Using Iterative Bayesian Updating
    14 years 2 months ago
    Biological Pathway Prediction from Multiple Data Sources Using Iterative Bayesian Updating
    Download  users.soe.ucsc.edu
    There is a diversity of functional genomics data, such as gene expression data from microarray experiments, phenotypic data from gene deletion experiments, protein-protein interac...
    Corey Powell, Joshua M. Stuart
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