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BMCBI
2004
83views more  BMCBI 2004»
13 years 8 months ago
VKCDB: Voltage-gated potassium channel database
Background: The family of voltage-gated potassium channels comprises a functionally diverse group of membrane proteins. They help maintain and regulate the potassium ion-based com...
Bin Li, Warren J. Gallin
NAR
2006
79views more  NAR 2006»
13 years 8 months ago
The Database of Macromolecular Motions: new features added at the decade mark
The database of molecular motions, MolMovDB 15 (http://molmovdb.org), has been in existence for the past decade. It classifies macromolecular motions and provides tools to interpo...
Samuel Flores, Nathaniel Echols, Duncan Milburn, B...
BMCBI
2006
129views more  BMCBI 2006»
13 years 8 months ago
A literature-based similarity metric for biological processes
Background: Recent analyses in systems biology pursue the discovery of functional modules within the cell. Recognition of such modules requires the integrative analysis of genome-...
Monica Chagoyen, Pedro Carmona-Saez, Concha Gil, J...
BMCBI
2010
126views more  BMCBI 2010»
13 years 6 months ago
PETALS: Proteomic Evaluation and Topological Analysis of a mutated Locus' Signaling
Background: Colon cancer is driven by mutations in a number of genes, the most notorious of which is Apc. Though much of Apc's signaling has been mechanistically identified o...
Gürkan Bebek, Vishal Patel, Mark R. Chance
NIPS
2008
13 years 10 months ago
Stochastic Relational Models for Large-scale Dyadic Data using MCMC
Stochastic relational models (SRMs) [15] provide a rich family of choices for learning and predicting dyadic data between two sets of entities. The models generalize matrix factor...
Shenghuo Zhu, Kai Yu, Yihong Gong