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BMCBI
2010
13 years 8 months ago
2010
Background: Homology is a crucial concept in comparative genomics. The algorithm probably most widely used for homology detection in comparative genomics, is BLAST. Usually a stri...
SDM
2011
SIAM
12 years 11 months ago
2011
SIAM
We present a model that improves entity entity link modeling in a mixed membership stochastic block model, by jointly modeling links with text about the entities that are linked i...
BMCBI
2010
2010
An intuitionistic approach to scoring DNA sequences against transcription factor binding site motifs
13 years 8 months ago
Background: Transcription factors (TFs) control transcription by binding to specific regions of DNA called transcription factor binding sites (TFBSs). The identification of TFBSs ...
ICML
2005
IEEE
14 years 9 months ago
2005
IEEE
Many biological propositions can be supported by a variety of different types of evidence. It is often useful to collect together large numbers of such propositions, together with...
BMCBI
2007
13 years 8 months ago
2007
Background: The precision of transcriptional regulation is made possible by the specificity of physical interactions between transcription factors and their cognate binding sites ...