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BIOCOMP
2006
13 years 10 months ago
Acceleration of Covariance Models for Non-coding RNA Search
Stochastic context-free grammar (SCFG) based models for non-coding RNA (ncRNA) gene searches are much more powerful than regular grammar based models due to the ability to model in...
Scott F. Smith 0002
JCM
2007
76views more  JCM 2007»
13 years 8 months ago
Scheduling Small Packets in IPSec Multi-accelerator Based Systems
—IPSec is a suite of protocols that adds security to communications at the IP level. Protocols within the IPSec suite make extensive use of cryptographic algorithms. Since these ...
Antonio Vincenzo Taddeo, Alberto Ferrante, Vincenz...
ICRA
2010
IEEE
194views Robotics» more  ICRA 2010»
13 years 7 months ago
Continuous collision detection for non-rigid contact computations using local advancement
Abstract— We present a novel algorithm to perform continuous collision detection(CCD) between non-rigid, deformable models using local advancement. Given the initial and final c...
Min Tang, Young J. Kim, Dinesh Manocha
ARC
2007
Springer
123views Hardware» more  ARC 2007»
14 years 28 days ago
Multiple Sequence Alignment Using Reconfigurable Computing
The alignment of multiple protein (or DNA) sequences is a current problem in Bioinformatics. ClustalW is the most popular heuristic algorithm for multiple sequence alignment. Pairw...
Carlos R. Erig Lima, Heitor S. Lopes, Maiko R. Mor...
COMPSYSTECH
2009
13 years 6 months ago
Polymorphic architectures: from media processing to supercomputing
: This paper reveals the evolution of the polymorphic architectures in the context of ever increasing computational demands of the user applications and the need for formal archite...
Georgi Kuzmanov