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BIOINFORMATICS
2011
13 years 25 days ago
A method for probing the mutational landscape of amyloid structure
Motivation: Proteins of all kinds can self-assemble into highly ordered β-sheet aggregates known as amyloid fibrils, important both biologically and clinically. However, the spe...
Charles W. O'Donnell, Jérôme Waldisp&...
RECOMB
2008
Springer
14 years 9 months ago
Ab Initio Whole Genome Shotgun Assembly with Mated Short Reads
Next Generation Sequencing (NGS) technologies are capable of reading millions of short DNA sequences both quickly and cheaply. While these technologies are already being used for r...
Paul Medvedev, Michael Brudno
RECOMB
2008
Springer
14 years 9 months ago
DLIGHT - Lateral Gene Transfer Detection Using Pairwise Evolutionary Distances in a Statistical Framework
Abstract. This paper presents an algorithm to detect lateral gene transfer (LGT) on the basis of pairwise evolutionary distances. The prediction is made from a likelihood ratio der...
Christophe Dessimoz, Daniel Margadant, Gaston H. G...
ICIP
2005
IEEE
14 years 2 months ago
Sequence-level models for distortion-rate behaviour of compressed video
In this paper, two empirical models for the sequence-level distortion-rate performance of predictive video source encoding are proposed. They require very limited amount of empiri...
Ruly Lai-U Choi, Michel T. Ivrlac, Eckehard G. Ste...
NLPRS
2001
Springer
14 years 1 months ago
Unknown Word Guessing and Part-of-Speech Tagging Using Support Vector Machines
The accuracy of part-of-speech (POS) tagging for unknown words is substantially lower than that for known words. Considering the high accuracy rate of up-to-date statistical POS t...
Tetsuji Nakagawa, Taku Kudo, Yuji Matsumoto