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DAC
2010
ACM
13 years 9 months ago
Detecting tangled logic structures in VLSI netlists
This work proposes a new problem of identifying large and tangled logic structures in a synthesized netlist. Large groups of cells that are highly interconnected to each other can...
Tanuj Jindal, Charles J. Alpert, Jiang Hu, Zhuo Li...
GECCO
2010
Springer
186views Optimization» more  GECCO 2010»
13 years 9 months ago
Genetic rule extraction optimizing brier score
Most highly accurate predictive modeling techniques produce opaque models. When comprehensible models are required, rule extraction is sometimes used to generate a transparent mod...
Ulf Johansson, Rikard König, Lars Niklasson
BMCBI
2010
103views more  BMCBI 2010»
13 years 8 months ago
Nonparametric methods for the analysis of single-color pathogen microarrays
Background: The analysis of oligonucleotide microarray data in pathogen surveillance and discovery is a challenging task. Target template concentration, nucleic acid integrity, an...
Omar J. Jabado, Sean Conlan, P. Lan Quan, Jeffrey ...
BMCBI
2010
117views more  BMCBI 2010»
13 years 8 months ago
Beyond rotamers: a generative, probabilistic model of side chains in proteins
Background: Accurately covering the conformational space of amino acid side chains is essential for important applications such as protein design, docking and high resolution stru...
Tim Harder, Wouter Boomsma, Martin Paluszewski, Je...
BMCBI
2010
176views more  BMCBI 2010»
13 years 8 months ago
Reverse engineering gene regulatory network from microarray data using linear time-variant model
nd: Gene regulatory network is an abstract mapping of gene regulations in living cells that can help to predict the system behavior of living organisms. Such prediction capability...
Mitra Kabir, Nasimul Noman, Hitoshi Iba