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CCECE
2006
IEEE
14 years 1 months ago
Survey of Biological High Performance Computing: Algorithms, Implementations and Outlook Research
During recent years there has been an explosive growth of biological data coming from genome projects, proteomics, protein structure determination, and the rapid expansion in digi...
Nasreddine Hireche, J. M. Pierre Langlois, Gabriel...
ISMB
1994
13 years 9 months ago
High Speed Pattern Matching in Genetic Data Base with Reconfigurable Hardware
Homologydetection in large data bases is probably the most time consuming operation in molecular genetic computing systems. Moreover, the progresses made all around the world conc...
Eric Lemoine, Joël Quinqueton, Jean Sallantin
WCE
2007
13 years 8 months ago
High-Performance Multigrid Solvers in Reconfigurable Hardware
—Partial Differential Equations (PDEs) play an essential role in modeling real world problems. The broad field of modeling such systems has drawn the researchers’ attention for...
Safaa J. Kasbah, Issam W. Damaj
ARC
2010
Springer
126views Hardware» more  ARC 2010»
13 years 5 months ago
Reconfigurable Communication Networks in a Parametric SIMD Parallel System on Chip
The SIMD parallel systems play a crucial role in the field of intensive signal processing. For most the parallel systems, communication networks are considered as one of the challe...
Mouna Baklouti, Philippe Marquet, Jean-Luc Dekeyse...
IPPS
2009
IEEE
14 years 2 months ago
Long time-scale simulations of in vivo diffusion using GPU hardware
To address the problem of performing long time simulations of biochemical pathways under in vivo cellular conditions, we have developed a lattice-based, reaction-diffusion model t...
Elijah Roberts, John E. Stone, Leonardo Sepulveda,...