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GPEM
2000
103views more  GPEM 2000»
13 years 7 months ago
Size Fair and Homologous Tree Crossovers for Tree Genetic Programming
Abstract. Size fair and homologous crossover genetic operators for tree based genetic programming are described and tested. Both produce considerably reduced increases in program s...
William B. Langdon
RECOMB
2005
Springer
14 years 7 months ago
Individual Gene Cluster Statistics in Noisy Maps
Abstract. Identification of homologous chromosomal regions is important for understanding evolutionary processes that shape genome evolution, such as genome rearrangements and larg...
Narayanan Raghupathy, Dannie Durand
ALMOB
2008
160views more  ALMOB 2008»
13 years 7 months ago
Syntenator: Multiple gene order alignments with a gene-specific scoring function
Background: Identification of homologous regions or conserved syntenies across genomes is one crucial step in comparative genomics. This task is usually performed by genome alignm...
Christian Rödelsperger, Christoph Dieterich
BMCBI
2007
120views more  BMCBI 2007»
13 years 7 months ago
Quantitative sequence-function relationships in proteins based on gene ontology
Background: The relationship between divergence of amino-acid sequence and divergence of function among homologous proteins is complex. The assumption that homologs share function...
Vineet Sangar, Daniel J. Blankenberg, Naomi Altman...
CPM
2004
Springer
86views Combinatorics» more  CPM 2004»
14 years 26 days ago
Optimizing Multiple Spaced Seeds for Homology Search
Optimized spaced seeds improve sensitivity and specificity in local homology search. Several authors have shown that multiple seeds can have better sensitivity and specificity t...
Jinbo Xu, Daniel G. Brown, Ming Li, Bin Ma