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» How to predict very large and complex crystal structures
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BMCBI
2010
107views more  BMCBI 2010»
13 years 3 months ago
Interaction prediction and classification of PDZ domains
Background: PDZ domain is a well-conserved, structural protein domain found in hundreds of signaling proteins that are otherwise unrelated. PDZ domains can bind to the C-terminal ...
Sibel Kalyoncu, Ozlem Keskin, Attila Gürsoy
CMPB
2010
97views more  CMPB 2010»
13 years 7 months ago
A ligand predication tool based on modeling and reasoning with imprecise probabilistic knowledge
Ligand prediction has been driven by a fundamental desire to understand more about how biomolecules recognize their ligands and by the commercial imperative to develop new drugs. ...
Weiru Liu, Anbu Yue, David J. Timson
COCOON
2009
Springer
14 years 3 months ago
Determination of Glycan Structure from Tandem Mass Spectra
Glycans are molecules made from simple sugars that form complex tree structures. Glycans constitute one of the most important protein modifications, and identification of glycans...
Sebastian Böcker, Birte Kehr, Florian Rasche
DAC
2010
ACM
13 years 9 months ago
Detecting tangled logic structures in VLSI netlists
This work proposes a new problem of identifying large and tangled logic structures in a synthesized netlist. Large groups of cells that are highly interconnected to each other can...
Tanuj Jindal, Charles J. Alpert, Jiang Hu, Zhuo Li...
ESTIMEDIA
2006
Springer
14 years 7 days ago
Loop Nest Splitting for WCET-Optimization and Predictability Improvement
This paper presents the influence of the loop nest splitting source code optimization on the worst-case execution time (WCET). Loop nest splitting minimizes the number of executed...
Heiko Falk, Martin Schwarzer