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BMCBI
2008
167views more  BMCBI 2008»
15 years 2 months ago
Expression profiles of switch-like genes accurately classify tissue and infectious disease phenotypes in model-based classificat
Background: Large-scale compilation of gene expression microarray datasets across diverse biological phenotypes provided a means of gathering a priori knowledge in the form of ide...
Michael Gormley, Aydin Tozeren
ISMB
2000
15 years 3 months ago
Genomic Fold Assignment and Rational Modeling of Proteins of Biological Interest
The first available genome of a multicellular organism, C. elegans, was used as a test case for protein fold assignment using PSI-BLAST, followed by rational structure modeling an...
J. Michael Sauder, Roland L. Dunbrack Jr.
SIGIR
2009
ACM
15 years 9 months ago
A study of inter-annotator agreement for opinion retrieval
Evaluation of sentiment analysis, like large-scale IR evaluation, relies on the accuracy of human assessors to create judgments. Subjectivity in judgments is a problem for relevan...
Adam Bermingham, Alan F. Smeaton
IUI
2003
ACM
15 years 7 months ago
Sticky notes for the semantic web
Computer-based annotation is increasing in popularity as a mechanism for revising documents and sharing comments over the Internet. One reason behind this surge is that viewpoints...
David R. Karger, Boris Katz, Jimmy J. Lin, Dennis ...
JCB
2008
81views more  JCB 2008»
15 years 2 months ago
Estimating the Ancestral Recombinations Graph (ARG) as Compatible Networks of SNP Patterns
Traditionally nonrecombinant genome, i.e., mtDNA or Y chromosome, has been used for phylogeography, notably for ease of analysis. The topology of the phylogeny structure in this c...
Laxmi Parida, Marta Melé, Francesc Calafell...