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» Hybrid Genetic Algorithm for DNA Sequencing with Errors
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BMCBI
2007
110views more  BMCBI 2007»
13 years 7 months ago
Selection of long oligonucleotides for gene expression microarrays using weighted rank-sum strategy
Background: The design of long oligonucleotides for spotted DNA microarrays requires detailed attention to ensure their optimal performance in the hybridization process. The main ...
Guangan Hu, Manuel Llinás, Jingguang Li, Pe...
ISMB
1994
13 years 8 months ago
An Improved System for Exon Recognition and Gene Modeling in Human DNA Sequence
A new version of the GRAIL system (Uberbacher and Mural, 1991; Mural et al., 1992; Uberbacher et al., 1993), called GRAILII, has recently been developed (Xu et al., 1994). GRAILII...
Yin Xu, J. Ralph Einstein, Richard J. Mural, Manes...
BMCBI
2006
117views more  BMCBI 2006»
13 years 7 months ago
Gene Designer: a synthetic biology tool for constructing artificial DNA segments
Background: Direct synthesis of genes is rapidly becoming the most efficient way to make functional genetic constructs and enables applications such as codon optimization, RNAi re...
Alan Villalobos, Jon E. Ness, Claes Gustafsson, Je...
AIPS
2008
13 years 9 months ago
A New Hybrid Genetic Algorithm for the Job Shop Scheduling Problem with Setup Times
In this paper we face the Job Shop Scheduling Problem with Sequence Dependent Setup Times by means of a genetic algorithm hybridized with local search. We have built on a previous...
Miguel A. González, Camino R. Vela, Ramiro ...
BMCBI
2010
109views more  BMCBI 2010»
13 years 7 months ago
Free energy estimation of short DNA duplex hybridizations
Background: Estimation of DNA duplex hybridization free energy is widely used for predicting cross-hybridizations in DNA computing and microarray experiments. A number of software...
Dan C. Tulpan, Mirela Andronescu, Serge Leger