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CSB
2005
IEEE
124views Bioinformatics» more  CSB 2005»
14 years 1 months ago
Multi-Scale Hierarchical Structure Prediction of Helical Transmembrane Proteins
As the first step toward a multi-scale, hierarchical computational approach for membrane protein structure prediction, the packing of transmembrane helices was modeled at the resi...
Zhong Chen, Ying Xu
IPPS
2002
IEEE
14 years 19 days ago
Characterizing NAS Benchmark Performance on Shared Heterogeneous Networks
The goal of this research is to develop performance profiles of parallel and distributed applications in order to predict their execution time under different network conditions....
Jaspal Subhlok, Shreenivasa Venkataramaiah, Amitoj...
HIPEAC
2009
Springer
14 years 2 months ago
Predictive Runtime Code Scheduling for Heterogeneous Architectures
Heterogeneous architectures are currently widespread. With the advent of easy-to-program general purpose GPUs, virtually every recent desktop computer is a heterogeneous system. Co...
Víctor J. Jiménez, Lluís Vila...
ICCAD
2007
IEEE
113views Hardware» more  ICCAD 2007»
14 years 2 months ago
The FAST methodology for high-speed SoC/computer simulation
— This paper describes the FAST methodology that enables a single FPGA to accelerate the performance of cycle-accurate computer system simulators modeling modern, realistic SoCs,...
Derek Chiou, Dam Sunwoo, Joonsoo Kim, Nikhil A. Pa...
ICS
2009
Tsinghua U.
14 years 2 months ago
Performance modeling and automatic ghost zone optimization for iterative stencil loops on GPUs
Iterative stencil loops (ISLs) are used in many applications and tiling is a well-known technique to localize their computation. When ISLs are tiled across a parallel architecture...
Jiayuan Meng, Kevin Skadron