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ALGORITHMICA
1999
99views more  ALGORITHMICA 1999»
13 years 8 months ago
Evolutionary Trees and Ordinal Assertions
Sequence data for a group of species is often summarized by a distance matrix M where M[s, t] is the dissimilarity between the sequences of species s and t. An ordinal assertion is...
Paul E. Kearney, Ryan Hayward, Henk Meijer
BMCBI
2006
127views more  BMCBI 2006»
13 years 8 months ago
Construction of phylogenetic trees by kernel-based comparative analysis of metabolic networks
Background: To infer the tree of life requires knowledge of the common characteristics of each species descended from a common ancestor as the measuring criteria and a method to c...
Sok June Oh, Je-Gun Joung, Jeong Ho Chang, Byoung-...
ALMOB
2007
129views more  ALMOB 2007»
13 years 8 months ago
Consistency of the Neighbor-Net Algorithm
Background: Neighbor-Net is a novel method for phylogenetic analysis that is currently being widely used in areas such as virology, bacteriology, and plant evolution. Given an inp...
David Bryant, Vincent Moulton, Andreas Spillner
GLVLSI
2003
IEEE
177views VLSI» more  GLVLSI 2003»
14 years 1 months ago
Congestion reduction in traditional and new routing architectures
In dense integrated circuit designs, management of routing congestion is essential; an over congested design may be unroutable. Many factors influence congestion: placement, rout...
Ameya R. Agnihotri, Patrick H. Madden
CORR
2007
Springer
76views Education» more  CORR 2007»
13 years 8 months ago
Tripartitions do not always discriminate phylogenetic networks
Phylogenetic networks are a generalization of phylogenetic trees that allow for the representation of non-treelike evolutionary events, like recombination, hybridization, or later...
Gabriel Cardona, Francesc Rosselló, Gabriel...