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CORR
2010
Springer
85views Education» more  CORR 2010»
13 years 7 months ago
The Motif Tracking Algorithm
: The search for patterns or motifs in data represents a problem area of key interest to finance and economic researchers. In this paper we introduce the Motif Tracking Algorithm, ...
William O. Wilson, Phil Birkin, Uwe Aickelin
BMCBI
2007
247views more  BMCBI 2007»
13 years 7 months ago
A survey of DNA motif finding algorithms
Background: Unraveling the mechanisms that regulate gene expression is a major challenge in biology. An important task in this challenge is to identify regulatory elements, especi...
Modan K. Das, Ho-Kwok Dai
BMCBI
2006
141views more  BMCBI 2006»
13 years 7 months ago
Identification of consensus RNA secondary structures using suffix arrays
Background: The identification of a consensus RNA motif often consists in finding a conserved secondary structure with minimum free energy in an ensemble of aligned sequences. How...
Mohammad Anwar, Truong Nguyen, Marcel Turcotte
WABI
2001
Springer
142views Bioinformatics» more  WABI 2001»
13 years 11 months ago
Pattern Matching and Pattern Discovery Algorithms for Protein Topologies
We describe algorithms for pattern matching and pattern learning in TOPS diagrams (formal descriptions of protein topologies). These problems can be reduced to checking for subgrap...
Juris Viksna, David Gilbert
ICCV
2007
IEEE
14 years 9 months ago
Optimization Algorithms for Labeling Brain Sulci Based on Graph Matching
Graph matching techniques are widely used in pattern recognition problems such as scene description, finger print identification, or face recognition. In this paper, we put forwar...
Faguo Yang, Frithjof Kruggel