179 search results - page 13 / 36 » Identifying Binding Sites in Sequential Genomic Data |
RECOMB
2001
Springer
14 years 8 months ago
2001
Springer
Phylogenetic footprinting is a comparative genomics approach for predicting transcription factor binding sites, where a set of orthologous regulatory regions are compared and short...
BMCBI
2007
13 years 8 months ago
2007
Background: ChIP-chip data, which indicate binding of transcription factors (TFs) to DNA regions in vivo, are widely used to reconstruct transcriptional regulatory networks. Howev...
WABI
2010
Springer
13 years 7 months ago
2010
Springer
Quantification of selective pressures on regulatory sequences is a central question in studying the evolution of gene regulatory networks. Previous methods focus primarily on sing...
BMCBI
2005
13 years 8 months ago
2005
Background: This paper addresses the problem of recognising DNA cis-regulatory modules which are located far from genes. Experimental procedures for this are slow and costly, and ...
NAR
2007
13 years 8 months ago
2007
We describe PReMod, a new database of genomewide cis-regulatory module (CRM) predictions for both the human and the mouse genomes. The prediction algorithm, described previously i...