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» Identifying Structural Motifs in Proteins
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DNA
2001
Springer
125views Bioinformatics» more  DNA 2001»
14 years 2 months ago
PNA-mediated Whiplash PCR
The directed evolution of proteins, using an in vitro domainal shuffling strategy was proposed in (J. Kolkman and W. Stemmer, Nat. Biotech. 19, 423 (2001). Due to backhybridization...
John A. Rose, Russell J. Deaton, Masami Hagiya, Ak...
NAR
1998
150views more  NAR 1998»
13 years 9 months ago
PROMISE: a database of information on prosthetic centres and metal ions in protein active sites
The PROMISE (Prosthetic centres and metal ions in protein active sites) database aims to gather together comprehensive sequence, structural, functional and bibliographic informati...
Kirill Degtyarenko, A. C. North, D. N. Perkins, Jo...
BMCBI
2005
101views more  BMCBI 2005»
13 years 9 months ago
PALSSE: A program to delineate linear secondary structural elements from protein structures
Background: The majority of residues in protein structures are involved in the formation of helices and -strands. These distinctive secondary structure patterns can be used to rep...
Indraneel Majumdar, S. Sri Krishna, Nick V. Grishi...
ICML
2010
IEEE
13 years 11 months ago
Learning Markov Logic Networks Using Structural Motifs
Markov logic networks (MLNs) use firstorder formulas to define features of Markov networks. Current MLN structure learners can only learn short clauses (4-5 literals) due to extre...
Stanley Kok, Pedro Domingos
IJBRA
2008
69views more  IJBRA 2008»
13 years 10 months ago
A matrix-based multilevel approach to identify functional protein modules
: Identifying functional modules is believed to reveal most cellular processes. There have been many computational approaches to investigate the underlying biological structures [2...
Suely Oliveira, Sang-Cheol Seok