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ICA
2007
Springer
14 years 2 months ago
Subspaces of Spatially Varying Independent Components in fMRI
Abstract. In contrast to the traditional hypothesis-driven methods, independent component analysis (ICA) is commonly used in functional magnetic resonance imaging (fMRI) studies to...
Jarkko Ylipaavalniemi, Ricardo Vigário
BMCBI
2011
13 years 3 months ago
The PathOlogist: An Automated Tool for Pathway-Centric Analysis
Background: The PathOlogist is a new tool designed to transform large sets of gene expression data into quantitative descriptors of pathway-level behavior. The tool aims to provid...
Sharon I. Greenblum, Sol Efroni, Carl F. Schaefer,...
WWW
2010
ACM
14 years 3 months ago
Empirical comparison of algorithms for network community detection
Detecting clusters or communities in large real-world graphs such as large social or information networks is a problem of considerable interest. In practice, one typically chooses...
Jure Leskovec, Kevin J. Lang, Michael W. Mahoney
BMCBI
2007
175views more  BMCBI 2007»
13 years 8 months ago
CLUSS: Clustering of protein sequences based on a new similarity measure
Background: The rapid burgeoning of available protein data makes the use of clustering within families of proteins increasingly important. The challenge is to identify subfamilies...
Abdellali Kelil, Shengrui Wang, Ryszard Brzezinski...
BMCBI
2008
111views more  BMCBI 2008»
13 years 8 months ago
Probabilistic base calling of Solexa sequencing data
Background: Solexa/Illumina short-read ultra-high throughput DNA sequencing technology produces millions of short tags (up to 36 bases) by parallel sequencing-by-synthesis of DNA ...
Jacques Rougemont, Arnaud Amzallag, Christian Isel...