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BMCBI
2002
133views more  BMCBI 2002»
13 years 7 months ago
Identification and characterization of subfamily-specific signatures in a large protein superfamily by a hidden Markov model app
Background: Most profile and motif databases strive to classify protein sequences into a broad spectrum of protein families. The next step of such database studies should include ...
Kevin Truong, Mitsuhiko Ikura
RECOMB
2005
Springer
14 years 8 months ago
A Hidden Markov Model Based Scoring Function for Mass Spectrometry Database Search
An accurate scoring function for database search is crucial for peptide identification using tandem mass spectrometry. Although many mathematical models have been proposed to scor...
Yunhu Wan, Ting Chen
WABI
2005
Springer
118views Bioinformatics» more  WABI 2005»
14 years 1 months ago
A Hidden Markov Technique for Haplotype Reconstruction
We give a new algorithm for the genotype phasing problem. Our solution is based on a hidden Markov model for haplotypes. The model has a uniform structure, unlike most solutions pr...
Pasi Rastas, Mikko Koivisto, Heikki Mannila, Esko ...
EMNLP
2008
13 years 9 months ago
A comparison of Bayesian estimators for unsupervised Hidden Markov Model POS taggers
There is growing interest in applying Bayesian techniques to NLP problems. There are a number of different estimators for Bayesian models, and it is useful to know what kinds of t...
Jianfeng Gao, Mark Johnson
CVPR
2007
IEEE
14 years 9 months ago
Segmental Hidden Markov Models for View-based Sport Video Analysis
We present a generative model approach to explore intrinsic semantic structures in sport videos, e.g., the camera view in American football games. We will invoke the concept of se...
Yi Ding, Guoliang Fan