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SPIRE
2009
Springer
14 years 3 months ago
On Entropy-Compressed Text Indexing in External Memory
A new trend in the field of pattern matching is to design indexing data structures which take space very close to that required by the indexed text (in entropy-compressed form) an...
Wing-Kai Hon, Rahul Shah, Sharma V. Thankachan, Je...
BMCBI
2007
124views more  BMCBI 2007»
13 years 8 months ago
Protein structural similarity search by Ramachandran codes
Background: Protein structural data has increased exponentially, such that fast and accurate tools are necessary to access structure similarity search. To improve the search speed...
Wei-Cheng Lo, Po-Jung Huang, Chih-Hung Chang, Ping...
CVPR
2007
IEEE
14 years 10 months ago
Stereo Matching via Disparity Estimation and Surface Modeling
Two new techniques are proposed to improve stereo matching performance in this work. First, to address the disparity discontinuity problem in occluded regions, we present a dispar...
Jong Dae Oh, Siwei Ma, C. C. Jay Kuo
CPM
2004
Springer
144views Combinatorics» more  CPM 2004»
14 years 1 months ago
A Simple Optimal Representation for Balanced Parentheses
We consider succinct, or highly space-efficient, representations of a (static) string consisting of n pairs of balanced parentheses, that support natural operations such as findi...
Richard F. Geary, Naila Rahman, Rajeev Raman, Venk...
CBMS
2007
IEEE
14 years 2 months ago
MS2DB: A Mass-Based Hashing Algorithm for the Identification of Disulfide Linkage Patterns in Protein Utilizing Mass Spectrometr
The tertiary structure and biological function of a protein can be better understood given knowledge of the number and location of its disulfide bonds. By utilizing mass spectrome...
Timothy Lee, Rahul Singh, Ten-Yang Yen, Bruce Mach...