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BMCBI
2007
151views more  BMCBI 2007»
13 years 8 months ago
Minimus: a fast, lightweight genome assembler
Background: Genome assemblers have grown very large and complex in response to the need for algorithms to handle the challenges of large whole-genome sequencing projects. Many of ...
Daniel D. Sommer, Arthur L. Delcher, Steven L. Sal...
SDM
2012
SIAM
281views Data Mining» more  SDM 2012»
11 years 11 months ago
Contextual Collaborative Filtering via Hierarchical Matrix Factorization
Matrix factorization (MF) has been demonstrated to be one of the most competitive techniques for collaborative filtering. However, state-of-the-art MFs do not consider contextual...
ErHeng Zhong, Wei Fan, Qiang Yang
BMCBI
2007
146views more  BMCBI 2007»
13 years 8 months ago
Bayesian hierarchical model for transcriptional module discovery by jointly modeling gene expression and ChIP-chip data
Background: Transcriptional modules (TM) consist of groups of co-regulated genes and transcription factors (TF) regulating their expression. Two high-throughput (HT) experimental ...
Xiangdong Liu, Walter J. Jessen, Siva Sivaganesan,...
AIPS
2009
13 years 9 months ago
Flexible Execution of Plans with Choice
Dynamic plan execution strategies allow an autonomous agent to respond to uncertainties while improving robustness and reducing the need for an overly conservative plan. Executive...
Patrick R. Conrad, Julie A. Shah, Brian C. William...
MP
2006
138views more  MP 2006»
13 years 8 months ago
A new ILP-based refinement heuristic for Vehicle Routing Problems
In the paper we address the Distance-Constrained Capacitated Vehicle Routing Problem (DCVRP), where k minimum-cost routes through a central depot have to be constructed so as to co...
Roberto De Franceschi, Matteo Fischetti, Paolo Tot...