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    BMCBI
    2010
    118views more  BMCBI 2010»
    Walk-weighted subsequence kernels for protein-protein interaction extraction
    13 years 7 months ago
    Walk-weighted subsequence kernels for protein-protein interaction extraction
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    Background: The construction of interaction networks between proteins is central to understanding the underlying biological processes. However, since many useful relations are exc...
    Seonho Kim, Juntae Yoon, Jihoon Yang, Seog Park
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    BMCBI
    2006
    108views more  BMCBI 2006»
    Gene function classification using Bayesian models with hierarchy-based priors
    13 years 7 months ago
    Gene function classification using Bayesian models with hierarchy-based priors
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    We investigate the application of hierarchical classification schemes to the annotation of gene function based on several characteristics of protein sequences including phylogenic ...
    Babak Shahbaba, Radford M. Neal
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    BMCBI
    2010
    159views more  BMCBI 2010»
    Predicting domain-domain interaction based on domain profiles with feature selection and support vector machines
    13 years 7 months ago
    Predicting domain-domain interaction based on domain profiles with feature selection and support vector machines
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    Background: Protein-protein interaction (PPI) plays essential roles in cellular functions. The cost, time and other limitations associated with the current experimental methods ha...
    Alvaro J. González, Li Liao
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    BMCBI
    2010
    116views more  BMCBI 2010»
    A hybrid approach to protein folding problem integrating constraint programming with local search
    13 years 7 months ago
    A hybrid approach to protein folding problem integrating constraint programming with local search
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    Background: The protein folding problem remains one of the most challenging open problems in computational biology. Simplified models in terms of lattice structure and energy func...
    Abu Zafer M. Dayem Ullah, Kathleen Steinhöfel
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    JIB
    2006
    220views more  JIB 2006»
    An assessment of machine and statistical learning approaches to inferring networks of protein-protein interactions
    13 years 7 months ago
    An assessment of machine and statistical learning approaches to inferring networks of protein-protein interactions
    Download  journal.imbio.de
    Protein-protein interactions (PPI) play a key role in many biological systems. Over the past few years, an explosion in availability of functional biological data obtained from hi...
    Fiona Browne, Haiying Wang, Huiru Zheng, Francisco...
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