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» Improving Mining Quality by Exploiting Data Dependency
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BMCBI
2010
112views more  BMCBI 2010»
13 years 7 months ago
Orientation-dependent backbone-only residue pair scoring functions for fixed backbone protein design
Background: Empirical scoring functions have proven useful in protein structure modeling. Most such scoring functions depend on protein side chain conformations. However, backbone...
Andrew J. Bordner
BMCBI
2007
97views more  BMCBI 2007»
13 years 7 months ago
Relating destabilizing regions to known functional sites in proteins
Background: Most methods for predicting functional sites in protein 3D structures, rely on information on related proteins and cannot be applied to proteins with no known relative...
Benoit H. Dessailly, Marc F. Lensink, Shoshana J. ...
SIGMOD
2007
ACM
179views Database» more  SIGMOD 2007»
14 years 7 months ago
How to barter bits for chronons: compression and bandwidth trade offs for database scans
Two trends are converging to make the CPU cost of a table scan a more important component of database performance. First, table scans are becoming a larger fraction of the query p...
Allison L. Holloway, Vijayshankar Raman, Garret Sw...
CC
2006
Springer
124views System Software» more  CC 2006»
13 years 11 months ago
Polyhedral Code Generation in the Real World
The polyhedral model is known to be a powerful framework to reason about high level loop transformations. Recent developments in optimizing compilers broke some generally accepted ...
Nicolas Vasilache, Cédric Bastoul, Albert C...
BMCBI
2006
146views more  BMCBI 2006»
13 years 7 months ago
Optimized Particle Swarm Optimization (OPSO) and its application to artificial neural network training
Background: Particle Swarm Optimization (PSO) is an established method for parameter optimization. It represents a population-based adaptive optimization technique that is influen...
Michael Meissner, Michael Schmuker, Gisbert Schnei...