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BMCBI
2010
223views more  BMCBI 2010»
13 years 2 months ago
MetNetGE: interactive views of biological networks and ontologies
Background: Linking high-throughput experimental data with biological networks is a key step for understanding complex biological systems. Currently, visualization tools for large...
Ming Jia, Suh-Yeon Choi, Dirk Reiners, Eve Syrkin ...
WWW
2002
ACM
14 years 8 months ago
Probabilistic query expansion using query logs
Query expansion has long been suggested as an effective way to resolve the short query and word mismatching problems. A number of query expansion methods have been proposed in tra...
Hang Cui, Ji-Rong Wen, Jian-Yun Nie, Wei-Ying Ma
BMCBI
2010
161views more  BMCBI 2010»
13 years 7 months ago
GATExplorer: Genomic and Transcriptomic Explorer; mapping expression probes to gene loci, transcripts, exons and ncRNAs
Background: Genome-wide expression studies have developed exponentially in recent years as a result of extensive use of microarray technology. However, expression signals are typi...
Alberto Risueño, Celia Fontanillo, Marcel E...
BMCBI
2010
128views more  BMCBI 2010»
13 years 7 months ago
VIGOR, an annotation program for small viral genomes
Background: The decrease in cost for sequencing and improvement in technologies has made it easier and more common for the re-sequencing of large genomes as well as parallel seque...
Shiliang Wang, Jaideep P. Sundaram, David Spiro
APWEB
2009
Springer
13 years 11 months ago
Ontology Evaluation through Text Classification
We present a new method to evaluate a search ontology, which relies on mapping ontology instances to textual documents. On the basis of this mapping, we evaluate the adequacy of on...
Yael Dahan Netzer, David Gabay, Meni Adler, Yoav G...