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BMCBI
2008
142views more  BMCBI 2008»
13 years 7 months ago
RNA STRAND: The RNA Secondary Structure and Statistical Analysis Database
Background: The ability to access, search and analyse secondary structures of a large set of known RNA molecules is very important for deriving improved RNA energy models, for eva...
Mirela Andronescu, Vera Bereg, Holger H. Hoos, Ann...
TCC
2012
Springer
218views Cryptology» more  TCC 2012»
12 years 2 months ago
Iterative Constructions and Private Data Release
In this paper we study the problem of approximately releasing the cut function of a graph while preserving differential privacy, and give new algorithms (and new analyses of exis...
Anupam Gupta, Aaron Roth, Jonathan Ullman
BMCBI
2007
133views more  BMCBI 2007»
13 years 7 months ago
MATLIGN: a motif clustering, comparison and matching tool
Background: Sequence motifs representing transcription factor binding sites (TFBS) are commonly encoded as position frequency matrices (PFM) or degenerate consensus sequences (CS)...
Matti Kankainen, Ari Löytynoja
KDD
2004
ACM
190views Data Mining» more  KDD 2004»
14 years 7 months ago
Kernel k-means: spectral clustering and normalized cuts
Kernel k-means and spectral clustering have both been used to identify clusters that are non-linearly separable in input space. Despite significant research, these methods have re...
Inderjit S. Dhillon, Yuqiang Guan, Brian Kulis
GRID
2007
Springer
14 years 1 months ago
Data placement for scientific applications in distributed environments
— Scientific applications often perform complex computational analyses that consume and produce large data sets. We are concerned with data placement policies that distribute dat...
Ann L. Chervenak, Ewa Deelman, Miron Livny, Mei-Hu...