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» In Search of the Bullwhip Effect
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CSB
2003
IEEE
14 years 4 months ago
Search for Evolution-Related-Oligonucleotides and Conservative Words in rRNA Sequences
We describe a method for finding ungapped conserved words in rRNA sequences that is effective, utilizes evolutionary information and does not depend on multiple sequence alignment...
Liaofu Luo, Li-Ching Hsieh, Fengmin Ji, Mengwen Ji...
IICS
2010
Springer
14 years 2 months ago
An Evaluation Framework for Semantic Search in P2P Networks
: We address the problem of evaluating peer-to-peer information retrieval (P2PIR) systems with semantic overlay structure. The P2PIR community lacks a commonly accepted testbed, su...
Florian Holz, Hans Friedrich Witschel, Gregor Hein...
BMCBI
2006
172views more  BMCBI 2006»
13 years 10 months ago
A novel scoring schema for peptide identification by searching protein sequence databases using tandem mass spectrometry data
Background: Tandem mass spectrometry (MS/MS) is a powerful tool for protein identification. Although great efforts have been made in scoring the correlation between tandem mass sp...
Zhuo Zhang, Shiwei Sun, Xiaopeng Zhu, Suhua Chang,...
BMCBI
2006
85views more  BMCBI 2006»
13 years 10 months ago
Searching for interpretable rules for disease mutations: a simulated annealing bump hunting strategy
Background: Understanding how amino acid substitutions affect protein functions is critical for the study of proteins and their implications in diseases. Although methods have bee...
Rui Jiang, Hua Yang, Fengzhu Sun, Ting Chen
MICRO
2008
IEEE
146views Hardware» more  MICRO 2008»
13 years 10 months ago
A small cache of large ranges: Hardware methods for efficiently searching, storing, and updating big dataflow tags
Dynamically tracking the flow of data within a microprocessor creates many new opportunities to detect and track malicious or erroneous behavior, but these schemes all rely on the...
Mohit Tiwari, Banit Agrawal, Shashidhar Mysore, Jo...