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» Including Biological Literature Improves Homology Search
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AI
2003
Springer
14 years 21 days ago
An Improved Ant Colony Optimisation Algorithm for the 2D HP Protein Folding Problem
The prediction of a protein’s structure from its amino-acid sequence is one of the most important problems in computational biology. In the current focus on a widely studied abst...
Alena Shmygelska, Holger H. Hoos
SISAP
2008
IEEE
175views Data Mining» more  SISAP 2008»
14 years 1 months ago
Anytime K-Nearest Neighbor Search for Database Applications
Many contemporary database applications require similarity-based retrieval of complex objects where the only usable knowledge of its domain is determined by a metric distance func...
Weijia Xu, Daniel P. Miranker, Rui Mao, Smriti R. ...
JIIS
2002
141views more  JIIS 2002»
13 years 7 months ago
Combining Approximation Techniques and Vector Quantization for Adaptable Similarity Search
Adaptable similarity queries based on quadratic form distance functions are widely popular in data mining application domains including multimedia, CAD, molecular biology or medica...
Christian Böhm, Hans-Peter Kriegel, Thomas Se...
NAR
2011
208views Computer Vision» more  NAR 2011»
12 years 10 months ago
MIPS: curated databases and comprehensive secondary data resources in 2010
The Munich Information Center for Protein Sequences (MIPS at the Helmholtz Center for Environmental Health, Neuherberg, Germany) has many years of experience in providing annotate...
Hans-Werner Mewes, Andreas Ruepp, Fabian J. Theis,...
ISMB
1994
13 years 8 months ago
An Improved System for Exon Recognition and Gene Modeling in Human DNA Sequence
A new version of the GRAIL system (Uberbacher and Mural, 1991; Mural et al., 1992; Uberbacher et al., 1993), called GRAILII, has recently been developed (Xu et al., 1994). GRAILII...
Yin Xu, J. Ralph Einstein, Richard J. Mural, Manes...